Text mining facilitates database curation - extraction of mutation-disease associations from Bio-medical literature
نویسندگان
چکیده
منابع مشابه
Text Mining Genotype-Phenotype Relationships from Biomedical Literature for Database Curation and Precision Medicine
The practice of precision medicine will ultimately require databases of genes and mutations for healthcare providers to reference in order to understand the clinical implications of each patient's genetic makeup. Although the highest quality databases require manual curation, text mining tools can facilitate the curation process, increasing accuracy, coverage, and productivity. However, to date...
متن کاملMutD - A PubMed Scale Resource for Protein Mutation-Disease Relations through Bio-Medical Literature Mining
Text mining approaches can accelerate the process of assembling knowledge from literature. In this abstract, we present our effort in assembling a resource for protein mutationdisease relations assembled from literature. Keywords—literature mining; protein mutation-disease
متن کاملDiMeX: A Text Mining System for Mutation-Disease Association Extraction
The number of published articles describing associations between mutations and diseases is increasing at a fast pace. There is a pressing need to gather such mutation-disease associations into public knowledge bases, but manual curation slows down the growth of such databases. We have addressed this problem by developing a text-mining system (DiMeX) to extract mutation to disease associations f...
متن کاملDisease-Associated Genes Extraction from Literature Database
Databases such as MEDLINE, OMIM, RefSeq and LocusLink serve as important information sources for biomedical studies. A search of several databases can yield vast quantities of information, so much in fact that the searcher may struggle to pinpoint the important information. This has highlighted the desirability of a specific tool to facilitate efficient database searching and extraction of info...
متن کاملText Mining Effectively Scores and Ranks the Literature for Improving Chemical-Gene-Disease Curation at the Comparative Toxicogenomics Database
The Comparative Toxicogenomics Database (CTD; http://ctdbase.org/) is a public resource that curates interactions between environmental chemicals and gene products, and their relationships to diseases, as a means of understanding the effects of environmental chemicals on human health. CTD provides a triad of core information in the form of chemical-gene, chemical-disease, and gene-disease inter...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: BMC Bioinformatics
سال: 2015
ISSN: 1471-2105
DOI: 10.1186/s12859-015-0609-x